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3
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="novoalign" version="latest">
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4 <repository changeset_revision="003907882a0c" name="package_novoalign" owner="geert-vandeweyer" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="velvet" version="latest">
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7 <repository changeset_revision="688d46996f1e" name="package_velvet" owner="geert-vandeweyer" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 <package name="samtools" version="0.1.18">
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10 <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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11 </package>
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12 <package name="blat_server" version="latest">
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13 <repository changeset_revision="455a4bd49c52" name="package_blat_server" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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14 </package>
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11
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15 <package name="clusterfast" version="0611">
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16 <install version="1.0">
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17 <actions>
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18 <action type="make_directory">$INSTALL_DIR</action>
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13
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19 <!-- will be activated when git repository is updated by clusterfast authors. -->
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20 <!--<action type="move_file"><source>cf_v1.1.jar</source><destination>$INSTALL_DIR</destination></action>-->
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21 <!--<action type="move_directory_files"><source_directory>cf_scripts</source_directory><destination_directory>$INSTALL_DIR/cf_scripts</destination_directory></action>-->
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22 <action type="set_environment">
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23 <!--<environment_variable action="set_to" name="CF_PATH">$INSTALL_DIR</environment_variable>-->
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15
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24 <environment_variable action="set_to" name="CF_PATH">./</environment_variable>
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13
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25 </action>
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11
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26 </actions>
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27 </install>
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28 </package>
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3
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29
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30 </tool_dependency>
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