Mercurial > repos > galaxyp > openms_mascotadapter
changeset 6:b4d8885a6cce draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 8fcd33df23901e111d6c18f450bd09cd8cb3819e
| author | galaxyp |
|---|---|
| date | Tue, 08 Aug 2017 13:18:11 -0400 |
| parents | e352895d458a |
| children | 3828c0dfd89b |
| files | MascotAdapter.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/MascotAdapter.xml Mon Aug 07 14:41:39 2017 -0400 +++ b/MascotAdapter.xml Tue Aug 08 13:18:11 2017 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> <!--Proposed Tool Section: [Identification]--> -<tool id="MascotAdapter" name="MascotAdapter" version="2.2.0"> +<tool id="MascotAdapter" name="MascotAdapter" version="2.2.0.1"> <description>Annotates MS/MS spectra using Mascot.</description> <macros> <token name="@EXECUTABLE@">MascotAdapter</token> @@ -142,7 +142,7 @@ #end if </command> <inputs> - <param name="param_in" type="data" format="text" label="input file in mzData format" help="(-in) <br>Note: In mode 'mascot_out' a Mascot results file (.mascotXML) is read"/> + <param name="param_in" type="data" format="txt" label="input file in mzData format" help="(-in) <br>Note: In mode 'mascot_out' a Mascot results file (.mascotXML) is read"/> <param name="param_mascot_in" display="radio" type="boolean" truevalue="-mascot_in" falsevalue="" checked="false" optional="True" label="if this flag is set the MascotAdapter will read in mzData and write Mascot generic format" help="(-mascot_in) "/> <param name="param_mascot_out" display="radio" type="boolean" truevalue="-mascot_out" falsevalue="" checked="false" optional="True" label="if this flag is set the MascotAdapter will read in a Mascot results file (.mascotXML) and write idXML" help="(-mascot_out) "/> <param name="param_instrument" type="text" size="30" value="Default" label="the instrument that was used to measure the spectra" help="(-instrument) ">