# HG changeset patch
# User galaxyp
# Date 1502212691 14400
# Node ID b4d8885a6cce3aaed4aa04081c21b077b45ff99a
# Parent  e352895d458ab7c8d6e0b26c6437a3809f766f3b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 8fcd33df23901e111d6c18f450bd09cd8cb3819e

diff -r e352895d458a -r b4d8885a6cce MascotAdapter.xml
--- a/MascotAdapter.xml	Mon Aug 07 14:41:39 2017 -0400
+++ b/MascotAdapter.xml	Tue Aug 08 13:18:11 2017 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
 <!--Proposed Tool Section: [Identification]-->
-<tool id="MascotAdapter" name="MascotAdapter" version="2.2.0">
+<tool id="MascotAdapter" name="MascotAdapter" version="2.2.0.1">
   <description>Annotates MS/MS spectra using Mascot.</description>
   <macros>
     <token name="@EXECUTABLE@">MascotAdapter</token>
@@ -142,7 +142,7 @@
 #end if
 </command>
   <inputs>
-    <param name="param_in" type="data" format="text" label="input file in mzData format" help="(-in) &lt;br&gt;Note: In mode 'mascot_out' a Mascot results file (.mascotXML) is read"/>
+    <param name="param_in" type="data" format="txt" label="input file in mzData format" help="(-in) &lt;br&gt;Note: In mode 'mascot_out' a Mascot results file (.mascotXML) is read"/>
     <param name="param_mascot_in" display="radio" type="boolean" truevalue="-mascot_in" falsevalue="" checked="false" optional="True" label="if this flag is set the MascotAdapter will read in mzData and write Mascot generic format" help="(-mascot_in) "/>
     <param name="param_mascot_out" display="radio" type="boolean" truevalue="-mascot_out" falsevalue="" checked="false" optional="True" label="if this flag is set the MascotAdapter will read in a Mascot results file (.mascotXML) and write idXML" help="(-mascot_out) "/>
     <param name="param_instrument" type="text" size="30" value="Default" label="the instrument that was used to measure the spectra" help="(-instrument) ">