Mercurial > repos > fubar > edger_test
changeset 8:8d34828733aa draft
Uploaded
| author | fubar |
|---|---|
| date | Wed, 12 Jun 2013 04:01:13 -0400 |
| parents | 7ef84c58999a |
| children | 9d76bc6a30a6 |
| files | rgedgeR/rgedgeRpaired.xml~ rgedgeR/tool_dependencies.xml rgedgeR/tool_dependencies.xml~ |
| diffstat | 3 files changed, 6 insertions(+), 5 deletions(-) [+] |
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--- a/rgedgeR/rgedgeRpaired.xml~ Wed Jun 12 03:59:58 2013 -0400 +++ b/rgedgeR/rgedgeRpaired.xml~ Wed Jun 12 04:01:13 2013 -0400 @@ -2,8 +2,8 @@ <description>1 or 2 level models for count data</description> <requirements> <requirement type="package" version="6.2">name=readline</requirement> - <requirement type="package" version="3.0.1">name=R</requirement> - <requirement type="package" version="2.12">name=BioCBasics</requirement> + <requirement type="package" version="3.0.1">name=package_R</requirement> + <requirement type="package" version="2.12">name=package_BioCBasics</requirement> </requirements> <command interpreter="python">
--- a/rgedgeR/tool_dependencies.xml Wed Jun 12 03:59:58 2013 -0400 +++ b/rgedgeR/tool_dependencies.xml Wed Jun 12 04:01:13 2013 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="package_readline_6_2" version="6.2"> + <package name="readline" version="6.2"> <repository changeset_revision="1301ec7705a8" name="package_readline_6_2" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" /> </package> <package name="package_R" version="3.0.1">
--- a/rgedgeR/tool_dependencies.xml~ Wed Jun 12 03:59:58 2013 -0400 +++ b/rgedgeR/tool_dependencies.xml~ Wed Jun 12 04:01:13 2013 -0400 @@ -9,8 +9,9 @@ <actions> <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.1.tar.gz</action> <action type="set_environment_for_install"> - <repository changeset_revision="1301ec7705a8" name="package_readline_6_2" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/"> - <package name="readline" version="6.2" /> + <repository changeset_revision="1301ec7705a8" name="package_readline_6_2" owner="boris" + toolshed="http://testtoolshed.g2.bx.psu.edu/"> + <package name="package_readline_6_2" version="6.2" /> </repository> </action> <action type="make_directory">$INSTALL_DIR</action>