Mercurial > repos > eugen > bs_seq_test_2
changeset 3:4abe38e3916e draft
Uploaded
| author | eugen |
|---|---|
| date | Thu, 16 Aug 2012 04:13:05 -0400 |
| parents | abbadfdcd395 |
| children | 3e1c8a543102 |
| files | bsmap_fasta.loc.sample |
| diffstat | 1 files changed, 16 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bsmap_fasta.loc.sample Thu Aug 16 04:13:05 2012 -0400 @@ -0,0 +1,16 @@ +#This is a sample file distributed with Galaxy that enables BSMAP +#to use a directory of reference FastA sequences data files.The bsmap_fasta.loc +#file has this format (longer white space characters are TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +# +#Your bsmap_fasta.loc file should include an entry per line for each +reference you have stored. For example: +# +#phiX174 phiX phiX174 /depot/data2/galaxy/phiX/base/phiX.fasta +#hg18canon hg18 hg18 Canonical /depot/data2/galaxy/hg18/base/hg18canon.fasta +#hg18full hg18 hg18 Full /depot/data2/galaxy/hg18/base/hg18full.fasta +#/orig/path/hg19.fa hg19 hg19 /depot/data2/galaxy/hg19/base/hg19.fasta +#...etc... +#