Mercurial > repos > estrain > data_manager_amrfinderplus_database_builder

changeset 4:ea3d7d37eddc draft

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Uploaded
author estrain
date Tue, 08 Mar 2022 03:08:58 +0000
parents 00cd5b1097e3
children 651b88b77357
files data_manager_amrfinderplus_database_builder/data_manager/data_manager_amrfinderplus_database_builder.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_amrfinderplus_database_builder/data_manager/data_manager_amrfinderplus_database_builder.xml	Tue Mar 08 03:01:52 2022 +0000
+++ b/data_manager_amrfinderplus_database_builder/data_manager/data_manager_amrfinderplus_database_builder.xml	Tue Mar 08 03:08:58 2022 +0000
@@ -5,7 +5,7 @@
         <requirement type="package">hmmer</requirement>
     </requirements>
     <command><![CDATA[
-        python '$__tool_directory__/data_manager_amrfinderplus_database_builder.py ${amrdbpath}' 
+        python $__tool_directory__/data_manager_amrfinderplus_database_builder.py --path $amrdbpath;
     ]]></command>
     <inputs>
       <param name="amrdbpath" type="text" label="Absolute Path of amrFinderPlus databases"/>