Mercurial > repos > eduardo > annotateviz
changeset 1:ce990f818362 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/annotateviz commit 9bbaa3eacc76ff3bf2b6da313cc0d85705f15dd1-dirty
| author | eduardo |
|---|---|
| date | Sat, 17 Jun 2017 13:45:05 -0400 |
| parents | 7537482eed36 |
| children | 31e855c95936 |
| files | annotateviz.xml |
| diffstat | 1 files changed, 6 insertions(+), 8 deletions(-) [+] |
line wrap: on
line diff
--- a/annotateviz.xml Sat Jun 17 13:31:06 2017 -0400 +++ b/annotateviz.xml Sat Jun 17 13:45:05 2017 -0400 @@ -13,14 +13,12 @@ --standalone --outdir $output.files_path $trackxml && -mv $output.files_path/index.html $output; - python $__tool_directory__/annotateviz.py $db > $__tool_directory__/trans.json; - - #sed "s@input_db@${__app__.security.encode_id($db.id)}@" $__tool_directory__/static/trinotateviz.html > $output; - mkdir ${output.files_path}; - cp $__tool_directory__/static/js/gff_app.js ${output.files_path}; - cp $__tool_directory__/static/css/main.css ${output.files_path}; - cp $__tool_directory__/static/trans.json ${output.files_path} +## $output.files_path/index.html $output; +python $__tool_directory__/annotateviz.py $db > $__tool_directory__/trans.json && +sed "s@input_db@${__app__.security.encode_id($db.id)}@" $__tool_directory__/static/trinotateviz.html > $output && +cp $__tool_directory__/static/js/gff_app.js ${output.files_path} && +cp $__tool_directory__/static/css/main.css ${output.files_path} && +cp $__tool_directory__/static/trans.json ${output.files_path}; ]]></command> <configfiles>