Mercurial > repos > drosofff > msp_sr_readmap_and_size_histograms
changeset 10:71a46afb9ce7 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_readmap_and_size_histograms commit e27d18d58ae095e7fad4b08b04370857a1d37964-dirty
| author | mvdbeek |
|---|---|
| date | Tue, 02 Feb 2016 12:54:00 -0500 |
| parents | 44a0b0fa52a9 |
| children | edd57052f0bb |
| files | readmap.xml |
| diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/readmap.xml Tue Feb 02 12:47:07 2016 -0500 +++ b/readmap.xml Tue Feb 02 12:54:00 2016 -0500 @@ -97,7 +97,7 @@ ## data frames implementation rm=read.delim("${readmap_dataframe}", header=T, row.names=NULL) - n_samples=length(unique(rm$sample)) + n_samples=length(unique(rm\$sample)) genes=unique(levels(rm$gene)) per_gene_readmap=lapply(genes, function(x) subset(rm, gene==x)) ####### ? n_genes=length(per_gene_readmap)