Mercurial > repos > dfornika > data_manager_build_kraken2_database
changeset 10:7cea257d1e77 draft
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 682a16af9bce01ff23176dbce291034d67947e58-dirty
author | dfornika |
---|---|
date | Thu, 28 Feb 2019 01:24:15 -0500 |
parents | 61c1109599f1 |
children | 6736d495130e |
files | data_manager_conf.xml |
diffstat | 1 files changed, 15 insertions(+), 0 deletions(-) [+] |
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--- a/data_manager_conf.xml Thu Feb 28 01:19:53 2019 -0500 +++ b/data_manager_conf.xml Thu Feb 28 01:24:15 2019 -0500 @@ -29,4 +29,19 @@ </output> </data_table> </data_manager> + <data_manager tool_file="data_manager/kraken2_build_standard.xml" id="kraken2_build_standard" version="1.0"> + <data_table name="kraken2_databases"> + <output> + <column name="value"/> + <column name="name"/> + <column name="path" output_ref="out_file"> + <move type="directory" relativize_symlinks="True"> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_database/${value}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_database/${value}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> </data_managers>