Mercurial > repos > dfornika > confindr
changeset 2:d2a5df8ada29 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/confindr/ commit 9e41ac63171c3e3a6fd2b4d018d0c60c9f1fbae1"
author | dfornika |
---|---|
date | Fri, 31 Jan 2020 18:43:21 +0000 |
parents | 627b2e75b1ad |
children | 2ab80b982480 |
files | confindr.xml |
diffstat | 1 files changed, 3 insertions(+), 2 deletions(-) [+] |
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--- a/confindr.xml Fri Jan 31 18:37:49 2020 +0000 +++ b/confindr.xml Fri Jan 31 18:43:21 2020 +0000 @@ -9,6 +9,7 @@ <expand macro="version_command" /> <command detect_errors="exit_code"><![CDATA[ + mkdir input && #if str( $reads_input.reads_input_selector ) == "paired" ln -s '$reads_input.reads_1' 'input/reads_R1.fastq' && ln -s '$reads_input.reads_2' 'input/reads_R2.fastq' && @@ -19,8 +20,8 @@ #end if confindr.py - --input_directory input \ - --output_name output \ + --input_directory input + --output_name output ]]></command>