Mercurial > repos > dfornika > cgview
changeset 11:0f16e3512425 draft
"planemo upload for repository https://github.com/dfornika/galaxy/tree/master/tools/cgview commit 62e7cd82cb9b209bf3f797ae288916e88bbe8bc6-dirty"
| author | dfornika |
|---|---|
| date | Fri, 01 Nov 2019 21:41:02 -0400 |
| parents | e87074bc1287 |
| children | 4733841a785e |
| files | cgview_xml_builder.xml |
| diffstat | 1 files changed, 4 insertions(+), 0 deletions(-) [+] |
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--- a/cgview_xml_builder.xml Fri Nov 01 21:37:07 2019 -0400 +++ b/cgview_xml_builder.xml Fri Nov 01 21:41:02 2019 -0400 @@ -12,6 +12,8 @@ -at_skew $at_skew -average $average -feature_labels $feature_labels + -use_opacity $use_opacity + -show_sequence_features $show_sequence_features -sequence '${reference}' -blast '${blast_output}' -output '${output}' @@ -25,6 +27,8 @@ <param name="at_skew" type="boolean" truevalue="T" falsevalue="F" label="Display AT Skew" checked="false" help=""/> <param name="average" type="boolean" truevalue="T" falsevalue="F" label="Display deviation of GC and AT values from the average for the entire genome." checked="true" help=""/> <param name="feature_labels" type="boolean" truevalue="T" falsevalue="F" label="Display feature labels from GenBank file" checked="false" help=""/> + <param name="use_opacity" type="boolean" truevalue="T" falsevalue="F" label="Draw BLAST hits with partial opacity" checked="false" help=""/> + <param name="show_sequence_features" type="boolean" truevalue="T" falsevalue="F" label="Draw features in the reference (GenBank) file" checked="false" help=""/> <param name="blast_output" type="data" format="tabular" /> </inputs> <outputs>