Mercurial > repos > devteam > bowtie2
changeset 13:55dcd6aad1ab draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/bowtie2 commit b22fc2e7243522b264f3d5d00706df8d18366405
author | devteam |
---|---|
date | Mon, 09 Jan 2017 04:30:45 -0500 |
parents | ed052d843da7 |
children | 85f0e9edb32d |
files | bowtie2_wrapper.xml tool_dependencies.xml |
diffstat | 2 files changed, 1 insertions(+), 10 deletions(-) [+] |
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--- a/bowtie2_wrapper.xml Sun Jan 08 07:58:14 2017 -0500 +++ b/bowtie2_wrapper.xml Mon Jan 09 04:30:45 2017 -0500 @@ -16,7 +16,7 @@ ln -s -f '$reference_genome.own_file' genome.fa && #set index_path = 'genome' #else: - #set index_path = '$reference_genome.index.fields.path' + #set index_path = $reference_genome.index.fields.path #end if ## execute bowtie2
--- a/tool_dependencies.xml Sun Jan 08 07:58:14 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,9 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="bowtie2" version="2.2.6"> - <repository changeset_revision="9d2f1e2f5919" name="package_bowtie_2_2_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> - </package> - <package name="samtools" version="1.2"> - <repository changeset_revision="5b7172f9b230" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> - </package> -</tool_dependency>