Mercurial > repos > deepakjadmin > mayatool2_test1
annotate parse.xml @ 0:5bc834b2ee27 draft
Uploaded
| author | deepakjadmin |
|---|---|
| date | Wed, 20 Jan 2016 07:49:17 -0500 |
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| children |
| rev | line source |
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| 0 | 1 <?xml version="1.0"?> |
| 2 <tool id="aaacaret005" name="Extract IDs From Prediction Result" version="0.0.1"> | |
| 3 <description>This tool parse the compound name/ids from prediction result</description> | |
| 4 <command> | |
| 5 awk -F '\t' '{print $1}' $predictionfile | sed '1d' | sed 's/"//g' | sed -e 's/^[ \t]*//;s/[ \t]*$//' >$Selected_Ids ; | |
| 6 </command> | |
| 7 | |
| 8 <inputs> | |
| 9 <param name="predictionfile" type="data" format="txt,csv,tabular" label="Predition Result File" help ="upload gcac prediction result file obtained from the tool 'Extract_Compound_IDs_From_Prediction_Result_based_on_scores'" /> | |
| 10 </inputs> | |
| 11 <outputs> | |
| 12 <data name="Selected_Ids" type="data" format="txt" label="Ids-${predictionfile.name}" /> | |
| 13 </outputs> | |
| 14 <help> | |
| 15 </help> | |
| 16 </tool> |