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1 <tool id="igblastmerge" name="IgBlastMerge" version="1.0">
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2 <description>Converting one or more "igBLASTreport parser" outputs for "VDJ Blast plot"</description>
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3 <command interpreter="python">
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4 igblastmerge.py
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5 --input
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6 #for $i, $f in enumerate($files)
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7 ${f.file}
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8 #end for
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9 --id
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10 #for $i, $f in enumerate($files)
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11 $(f.id)
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12 #end for
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13 --output $out_file
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14 </command>
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15 <inputs>
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16 <repeat name="files" title="File" min="1" default="1">
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17 <param name="file" format="tabular" type="data" label="Data to Process" />
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18 <param name="id" type="text" label="ID" />
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19 </repeat>
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20 </inputs>
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21 <outputs>
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22 <data format="tabular" name="out_file" />
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23 </outputs>
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24 <help>
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25 Step 3 of the Immune Repertoire tools, merges the parsed reports generated in step 2 into one file with an Sample ID.
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26 </help>
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27
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28 </tool>
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