Mercurial > repos > davidvanzessen > argalaxy_tools

changeset 41:85566b336a72 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author davidvanzessen
date Tue, 26 Jan 2016 03:01:48 -0500
parents a2fdcf1a2e50
children 65134a538c5a
files report_clonality/r_wrapper.sh
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/report_clonality/r_wrapper.sh	Tue Jan 26 02:58:17 2016 -0500
+++ b/report_clonality/r_wrapper.sh	Tue Jan 26 03:01:48 2016 -0500
@@ -31,7 +31,7 @@
 cp $dir/script.js $outputDir
 cp $dir/jquery-1.11.0.min.js $outputDir
 samples=`cat $outputDir/samples.txt`
-CIRCOSTOOLS="/home/galaxy/Downloads/circos-master/tools"
+#CIRCOSTOOLS="/home/galaxy/Downloads/circos-master/tools"
 echo "<html><center><h1><a href='index.html'>Click here for the results</a></h1>Tip: Open it in a new tab (middle mouse button or right mouse button -> 'open in new tab' on the link above)<br />" > $2
 echo "<table border = 1>" >> $2
 echo "<thead><tr><th>Sample/Replicate</th><th>All</th><th>Productive</th><th>Unique Productive</th><th>Unproductive</th><th>Unique Unproductive</th></tr></thead>" >> $2