Mercurial > repos > david-hoover > garbage1
changeset 6:2cef58c36b0f draft
Deleted selected files
| author | david-hoover |
|---|---|
| date | Wed, 12 Sep 2012 11:41:34 -0400 |
| parents | 23fc4a7dcf37 |
| children | edf43f311743 |
| files | simple_tool.xml |
| diffstat | 1 files changed, 0 insertions(+), 36 deletions(-) [+] |
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--- a/simple_tool.xml Wed Sep 12 11:40:57 2012 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,36 +0,0 @@ -<?xml version="1.0"?> -<tool id="simple_tool" name="Simple Tool"> - <description>from /home or /data (Helix/Biowulf only)</description> - <command interpreter="sh">simple_tool.sh '$filepath' $output $userEmail</command> - <inputs> - <param name="filepath" type="text" size="100" label="File path (on Helix)" /> - </inputs> - <outputs> - <data format="txt" name="output" label="Helix Import: $filepath" /> - </outputs> - <help> - -.. class:: infomark - -**Copying files** - -This tool will allow you to upload a single file that is in the /home or /data areas. There is no browse function, -however, so you will need to give the full path name. If you have permission to read the file, Galaxy can import the file. - -.. class:: warningmark - -**Important Notes** - -- The file path must be a file, not a directory -- You must give the fullpath to the file (/home/user/myfile.txt, not ./myfile.txt) -- You must have permission to read the file - ------ - -**Example** - -- /home/user/bamfiles/abc123.bam -- /data/anotheruser/data/good_data/very_good_data.txt - - </help> -</tool>