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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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>K03455|HIVHXB2CG_1312_1798_2_0_0_1_0_0_a/1
---------------------------------TTATCAGAAGG----------------
AGCCACCCCACAAGATTTAAAC--ACCATGCTACACCC-------AGTGGGGGGACATCA
AGCAGCCA--
>K03455|HIVHXB2CG_1302_1790_0_0_0_1_0_0_1c/1
-----------------------GTTTTCAGCATTATCAGAAGG----------------
AGCCACCCCACAAGATTTAAAC--ACCATGCTAAACAC-------AGTGGGGGGACAT--
----------
>K03455|HIVHXB2CG_1286_1769_0_0_0_4_0_0_0/1
-------CAGAAGTGATACCCATGTTTTCAGCATTATCAGAAGG----------------
AGCCACCCCACAAGATTTAAAC--ACCATGCTAAA-------------------------
----------
>K03455|HIVHXB2CG_6810_7300_0_0_0_0_0_0_2d/1
-------TGT-------------AACACCTCAGTCATTA------CACAGGCCTGTCCAA
AGGTATCCTTTGAGCCAATTCC--CATACATTATTGTG----------------------
----------
>K03455|HIVHXB2CG_6323_6872_1_0_0_2_0_0_50/1
-------ATG-------------TATG---------------------GGAATTGGCTGA
AAGGATACCTTTGGACAGGCCT--GAGTAATGACTGAGGTGTTACAA---------CTTG
TC--------
>K03455|HIVHXB2CG_7609_8146_1_0_0_1_0_0_5e/1
-------AA--------------GCTTGTGTAATTGTTAATTTC---TCTGTCCCACTCC
ATCCAGGTCGTGTGATTCCAAC--TCTGTTCCAG--------------------------
AG--------
>K03455|HIVHXB2CG_2685_3250_0_0_0_0_0_0_46/1
-------AA--------------AATTTCAAA----------------------------
AATTGGGCCTGAAAATCCATAC--AATACTCCAGTATT-TGCCATAAAGAAAAAAGACAG
TA--------
>K03455|HIVHXB2CG_217_724_2_1_0_2_0_0_36/1
-------GC--------------CTGCATGGAATGGATGACCCGGAGAGAGAAGTGTTAG
AGTGGAGGTTTGAGAGCCACCT--AGCAATTCA---------------------------
----------
>K03455|HIVHXB2CG_8325_8818_2_0_0_2_0_0_15/1
-------GTA-------------CTTTCTATAGTGAATAGAGTTAGGCAGGTATATTCAC
CATTATCGTTTGAGACCCACCT--CCCAACCC----------------------------
----------
>K03455|HIVHXB2CG_756_1235_2_0_0_1_0_0_34/1
-----------------------------GGT----------------------------
GATATGGGCTGATGTACCATTT--GCCCCTGGATGTTC-TGCACTATAGGGTAATTTTGG
CTGACCTGAT
>K03455|HIVHXB2CG_1835_2322_3_0_0_1_0_0_57/1
-------ATAGAG----------CTTCCTTTAGTTGCCCCCCTATCTTTATTGTGACGAG
GGGACGTTGCCAAAGAGTGACC--TG--------------------------AGG-----
----------
>K03455|HIVHXB2CG_2894_3537_2_0_0_0_0_0_18/1
-------------------------------------------TTTTTCAGTTCGCTTAG
ATGAAGACTTCAGGCAGTATAC--TGCATTTACCATACCTAGTATAAACAATGAG-----
----------
>K03455|HIVHXB2CG_3672_4151_0_0_0_1_0_0_27/1
ATAACCACAGAA-----------------AGCATAGTAATATGG----------------
GGAAAGACTCCTAAATTTAAACTGCCCATACAAAA---------------GGAAACAT--
----------
>K03455|HIVHXB2CG_4939_5430_1_0_0_0_0_0_49/1
---------------GACCAGCAAAGCACCTCTGGAAAGGTGAAGGGGCAGTAGTAATAC
AAGATAATAGTGACATAAAAGTAGT-----------------------------------
----------------------
>K03455|HIVHXB2CG_4957_5462_2_0_0_1_0_0_2e/1
---------------------------------GGAAAGGTGAAGGGGCAGTAGTAATAC
AAGATAATAGTGACATAACAGTAGTG----------------------------------
-----CGAAGAAGAAAAGCAAA
>K03455|HIVHXB2CG_3027_3517_0_0_0_6_0_0_53/1
--------------------------------------TTTTATGGTTCATAATCCACTC
CATGTACTGGTTCTTTTAGAATCTCTCATTTTTCT--GCCCGTTCTAGCT----------
----------------------
>K03455|HIVHXB2CG_3441_3888_1_0_0_0_0_0_5c/1
-------------GAAGCAGAGCTAGAACTGGCAGAAAACAGAGAGATTCTAAAATAACC
AGTACATGGAGTGTATTATGACC-------------------------------------
----------------------
>K03455|HIVHXB2CG_5108_5621_3_0_0_2_0_0_23/1
---------------------------------------------CTCTAGTGTCCATTC
ATTGTGTGGCTCCCTCTGTGGCCCTTGGTCTTCTTGGGCTTGTTCCATCTCTCCT-----
----------------------
>K03455|HIVHXB2CG_3447_3973_0_0_0_1_0_0_1f/1
TGATTTGTTGTGTCAGTTAGGGTGACAACT--------TTTTGTGTTCCTCTATTAGTAA
CATATCCTGCTTTTCCTA------------------------------------------
----------------------
>K03455|HIVHXB2CG_2276_2810_0_0_0_0_0_0_58/1
----------------------------------GAAGTCTTGAGTTCTCTTATTAA---
---------GTTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTC----
----------------------
>K03455|HIVHXB2CG_2252_2786_0_0_0_0_0_0_c/1
------------------------------------------------------------
----------TTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTCTTT-
-ATGGCAAATACTGGAGTATTG
>K03455|HIVHXB2CG_4803_5329_1_0_0_2_0_0_1b/1
---------------GGGGGGAACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACA
GACATACAAACTAAAGAATTACAA------------------------------------
---------------------A
>K03455|HIVHXB2CG_4642_5125_0_0_0_3_0_0_28/1
------------------------------------------------------------
------------TAAGGTGTTTTACTAAACTTTTCCATGTTGTAATCCTCATCCTGTCTC
CTTGCCACACAATCATCACCTG