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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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>K03455|HIVHXB2CG_5150_5584_1_0_0_2_0_0_42/1
GAT---------------------------------------------------------
----------------------------GGTTTTATAGACATCACTATGAAAGCCCTCAT
CCAAGAAAAAGTTCAGAAGTACACA------------------TCCCACTAGG
>K03455|HIVHXB2CG_3569_4048_0_0_0_4_0_0_3e/1
AA----------------------------------------------------------
-------------------------------TTTATCAAGAGCCATTTAAAAATCTGAAA
ACAGGAAAATATGCAAGAATGAGGGG--------------TGCCCACACTAAT
>K03455|HIVHXB2CG_6322_6838_1_0_0_0_1_0_63/1
AATTG----TGGGTCACAGTCT---------ATTATGGGGTACC----TGTGTGGC----
-----AGGAAGCAACCACCACTCTATT-----------------------TTGTGCATC-
-----------------------------------------------------
>K03455|HIVHXB2CG_5794_6187_2_0_0_0_0_0_5b/1
AGCAGA--ATAGGCGTTACTCG---------ACAGAGGAGAGCA----AGAAATGT----
-----AGCCAGTAGATCCTAGACTAT-------------------------AGCCCTGG-
-----------------------------------------------------
>K03455|HIVHXB2CG_906_1404_1_0_0_3_0_0_45/1
--------------------------------------GGAGCT----AGAACGAT----
-----TCGCAGTTAATCCTGGCGTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGG
A----------------------------------------------------
>K03455|HIVHXB2CG_1667_2209_4_0_0_2_0_0_2a/1
----GAGGGGGAGTTGTTGTCT---------GTACCCCAGACCT----GAAGCTCTCTTC
TTGTGGGGCTGTTGGCTCTGGTCTGCT---------------------------------
-----------------------------------------------------
>K03455|HIVHXB2CG_1644_2213_4_0_0_3_0_0_4f/1
TTCTGAGGGGGAGATGTTGTCT---------CTAGCCCAGACCT----GAAGCTCTCTTC
TGGTGGGGCAGTTGGCTCTGGTC-------------------------------------
-----------------------------------------------------
>K03455|HIVHXB2CG_5034_5548_1_0_0_4_0_0_13/1
A-------------------------------------GGGATTATGGAAAACAGA----
-----TGGCAGGTGATGATTGTGTGGCAATTAGACAGGATGAGGATTAGAACATGG----
-----------------------------------------------------
>K03455|HIVHXB2CG_9174_9651_1_0_0_0_0_0_4e/1
------------CGGGCACAC----------------------------ACT--------
ACTTGAAGCACTCAAGGCAAGCTTTATTGAGGCTTAAGCAGTGGGTTCCCTAG--TTAGC
-----------------------------------------------------
>K03455|HIVHXB2CG_9142_9638_2_0_0_2_0_0_3c/1
------------------------------------------------------------
-CTTGAAGCACTCAAGGCAAGCTTTATTGCGGCTTAATCAGTGGGTTCCCTAG--TTAGC
CAGA----------------------------------------GAGCTCCCA
>K03455|HIVHXB2CG_8231_8877_0_0_0_3_0_0_25/1
---------------------------------------------------------TGC
TGCTGGCTCAGCTCGTCT---CATTCATTCCCTTACAGTAGGCCATCCAATCACACTACA
TATT-------------------------------------------GACCAC
>K03455|HIVHXB2CG_8446_8894_4_0_0_3_0_0_10/1
------------GCTGCTCCC----------------------------ACCCTATCTTG
TGCTGGCTCAGCTCGTCT---CATTGTTTCCCTTACAGTAGGCCATCCAATCA-------
-----------------------------------------------------
>K03455|HIVHXB2CG_5329_5821_2_0_0_2_0_0_43/1
------------------------------------------------------------
TCCTCTGTCGAGTAACGC---CTATTCTGCTATGACGACACCCAATTCTGAAA--CTGGA
TAAA--------------------------------------CAGCAGTTGTT
>K03455|HIVHXB2CG_7972_8486_1_0_0_0_0_0_e/1
------------------------------------------------------------
--------------------------------TGCCAAGGATCCGTTCACTAA--TCGAA
TGGA---------TCTGTCTCTGTCTCTCTCTCCACCTTCTTCTTCTATTCCT
>K03455|HIVHXB2CG_2808_3255_0_0_0_1_0_0_22/1
------------------------------------------------------------
TTCTGGGAAGTTCAAT----------------TAGGAATACCACATCCCGCAGGGTTAAA
AAAG---------AAAAAATCAGT------------------AACAGTACTGG
>K03455|HIVHXB2CG_3580_4035_1_0_0_0_0_0_3/1
------------------------------------------------------------
CTATG------TTTAC----------------TTCTAATCCCGAATCCTGCAAAGCTAGA
TAAAT----TGCTTGTAACTCAGTC-----------------TTCTGATTTGT
>K03455|HIVHXB2CG_9061_9383_1_0_0_4_0_0_3b/1
------------C------ACTTATTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCAC
TCCCAAAGAAGACAAG----ATATCCTTGATC----------------------------
-----------------------------------------------------
>K03455|HIVHXB2CG_9067_9580_2_0_0_1_0_0_4c/1
------------------------TTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCAC
TGCCAAAGAAGACAAG----ATATCCTTGATCTGAGGA----------------------
-----------------------------------------------------
>K03455|HIVHXB2CG_7_537_2_0_0_1_0_0_1e/1
-------------------------------------------------GGCTAATTCAC
TCCCAACGAAGACAAG----ATATCCTTGATCTGTGGATGTACCACCCACAAG-------
-------------------------------------------GCTACTTCCC
>K03455|HIVHXB2CG_4165_4569_2_0_0_3_0_0_8/1
---------------------------------ACAACGGAATTGG---AGGAAATGAAC
CAGTAGATAAATTAGT----CAGTGCTGGAATCAGGAAAGTACTATTTTT----------
-----------------------------------------------------
>K03455|HIVHXB2CG_3703_4231_2_0_0_1_0_0_62/1
-----------------------------------AATAGTACTTT---CCTGATTCCAG
CACTGACTAAATTATC----TACTTGTTCATTTCCTCCAATTCCTTTGTGTG--------
-----------------------------------------------------
>K03455|HIVHXB2CG_5977_6467_2_0_0_2_0_0_1/1
-----------------------------GAAGAAGCGGAGACAGC---GACGAAGAGCT
CATCAGAACAGTCAGA----CTCATCAAGCTTCTCAATCAAATCAG--------------
-----------------------------------------------------
>K03455|HIVHXB2CG_5968_6386_1_0_0_1_0_0_d/1
--------------------CTATGGCAGGAAGAAGCGGAGACAGC---GACGAAGAGCT
CATCAGAACAGTCAGA----CTCATCAAGCTTCTGTA-----------------------
-----------------------------------------------------
>K03455|HIVHXB2CG_5989_6545_2_0_0_1_0_0_19/1
-----------------------------------------ACAGC---GACGAAGAGCT
CATCAGAACAGACAGA----CTCATCAAGCTTCTCTATCAAAGCAGTAAGTA--------
--------------------------------------------TTACAT---