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annotate test-data/files/NODE_14.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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1 >K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1
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2 CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATA
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3 A------TTGCCTTAC--------------------------------------------
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4 ---------------------
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5 >K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1
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6 -----------------------------------------------AGGATTTTACATA
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7 A------TTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCA
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8 ----------------CTA--
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9 >K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1
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10 --------------------------------------------ACTTTATATTTATATA
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11 A------TTCACTTCTCCAATTGTCC----------------CTCATCTCTCCTCCTCCA
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12 GGTCTGAAG---ATCTCGG--
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13 >K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1
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14 TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATA
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15 A------TTCCCTTCT--------------------------------------------
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16 ---------------------
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17 >K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1
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18 ------------------------------------------------------TCCAAG
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19 -----CCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTA
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20 CTTCAATAA------------
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21 >K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1
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22 ------------------------------ACCCATCTTATAGCA-AAATCCTTTCCAAG
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23 -----CCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA--------------
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24 ---------------------
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25 >K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1
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26 -----------------------------------------TCTACATAGTCTCTAAAGG
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27 GTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCT---------AT------
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28 ---ACATTC------------
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29 >K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1
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30 -----------------------------------------AATA-GCAATTTGTACAAG
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31 -------CAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCT---------CTCGTCTA
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32 -GGATCAAC------------
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33 >K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1
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34 -----------------------------------------TGTG-TTCAGCTGTACTAT
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35 -------TATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT-
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36 ---------------------
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37 >K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1
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38 ------------------------------------------------------------
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39 -----------CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTG
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40 CTTTGATAGAGAAGCTTGATG
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41 >K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1
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42 ---------TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTA
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43 A------TATTTGATT--------------------------------------------
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44 -----------AACATCTAA-