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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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>K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1
CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATA
A------TTGCCTTAC--------------------------------------------
---------------------
>K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1
-----------------------------------------------AGGATTTTACATA
A------TTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCA
----------------CTA--
>K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1
--------------------------------------------ACTTTATATTTATATA
A------TTCACTTCTCCAATTGTCC----------------CTCATCTCTCCTCCTCCA
GGTCTGAAG---ATCTCGG--
>K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1
TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATA
A------TTCCCTTCT--------------------------------------------
---------------------
>K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1
------------------------------------------------------TCCAAG
-----CCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTA
CTTCAATAA------------
>K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1
------------------------------ACCCATCTTATAGCA-AAATCCTTTCCAAG
-----CCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA--------------
---------------------
>K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1
-----------------------------------------TCTACATAGTCTCTAAAGG
GTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCT---------AT------
---ACATTC------------
>K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1
-----------------------------------------AATA-GCAATTTGTACAAG
-------CAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCT---------CTCGTCTA
-GGATCAAC------------
>K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1
-----------------------------------------TGTG-TTCAGCTGTACTAT
-------TATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT-
---------------------
>K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1
------------------------------------------------------------
-----------CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTG
CTTTGATAGAGAAGCTTGATG
>K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1
---------TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTA
A------TATTTGATT--------------------------------------------
-----------AACATCTAA-