19
|
1 import tarfile
|
20
|
2 from galaxy.datatypes.data import *
|
15
|
3 from galaxy.datatypes.metadata import MetadataElement
|
|
4 from galaxy.datatypes.binary import Binary
|
|
5 from galaxy.datatypes import metadata
|
|
6 from galaxy.datatypes.sniff import *
|
19
|
7
|
15
|
8
|
|
9 class Tar( Binary ):
|
16
|
10 """Class describing a BAM binary file"""
|
|
11 file_ext = "tar"
|
|
12 def sniff( self, filename ):
|
|
13 try:
|
|
14 if tarfile.is_tarfile(filename):
|
15
|
15 return True
|
16
|
16 except:
|
|
17 return False
|
15
|
18
|
|
19 def set_peek( self, dataset, is_multi_byte=False ):
|
|
20 if not dataset.dataset.purged:
|
17
|
21 dataset.peek = "Tar file"
|
|
22 dataset.blurb = data.nice_size( dataset.get_size() )
|
15
|
23 else:
|
17
|
24 dataset.peek = 'file does not exist'
|
|
25 dataset.blurb = 'file purged from disk'
|
15
|
26
|
|
27 def display_peek( self, dataset ):
|
|
28 try:
|
|
29 return dataset.peek
|
|
30 except:
|
|
31 return "Tar file" |