Mercurial > repos > da-intersect > ap11_test
annotate protein_generator.sh @ 5:795f289b64db draft
First complete upload, containing the datatype TAR.
author | da-intersect |
---|---|
date | Wed, 10 Apr 2013 02:41:02 -0400 |
parents | |
children |
rev | line source |
---|---|
5
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
1 #!/bin/bash |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
2 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
3 if (type -p java >> /dev/null); then |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
4 _java=java |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
5 elif [[ -n "$JAVA_HOME" ]] && [[ -x "$JAVA_HOME/bin/java" ]]; then |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
6 _java="$JAVA_HOME/bin/java" |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
7 else |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
8 echo "You must install java before runing this tool" |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
9 exit 1 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
10 fi |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
11 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
12 if [[ "$_java" ]]; then |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
13 version=$("$_java" -version 2>&1 | awk -F '"' '/version/ {print $2}') |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
14 if ! [[ "$version" > "1.6" ]]; then |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
15 echo "Java version should be > 1.6" |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
16 exit 1 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
17 fi |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
18 fi |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
19 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
20 if [ $# -eq 0 ] |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
21 then |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
22 echo "USAGE ap11Runner.sh APPNAME [ARGS]"; |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
23 exit; |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
24 fi |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
25 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
26 DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
27 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
28 jar_path="${DIR}/jars/${1}" |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
29 shift |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
30 |
795f289b64db
First complete upload, containing the datatype TAR.
da-intersect
parents:
diff
changeset
|
31 java -jar $jar_path $@ |