diff protein_generator.sh @ 5:795f289b64db draft

First complete upload, containing the datatype TAR.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/protein_generator.sh	Wed Apr 10 02:41:02 2013 -0400
@@ -0,0 +1,31 @@
+#!/bin/bash
+
+if (type -p java >> /dev/null); then
+    _java=java
+elif [[ -n "$JAVA_HOME" ]] && [[ -x "$JAVA_HOME/bin/java" ]];  then
+    _java="$JAVA_HOME/bin/java"
+else
+    echo "You must install java before runing this tool"
+    exit 1
+fi
+
+if [[ "$_java" ]]; then
+    version=$("$_java" -version 2>&1 | awk -F '"' '/version/ {print $2}')
+    if ! [[ "$version" > "1.6" ]]; then
+        echo "Java version should be > 1.6"
+	exit 1
+    fi
+fi
+
+if [ $# -eq 0 ]
+then
+  echo "USAGE ap11Runner.sh APPNAME [ARGS]";
+  exit;
+fi
+
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+
+jar_path="${DIR}/jars/${1}"
+shift
+
+java -jar $jar_path $@