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changeset 50:0887e13644b8

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author Michael R. Crusoe <mcrusoe@msu.edu>
date Sat, 12 Jul 2014 17:03:04 -0400
parents 25a176335337
children 3357f097d3c9
files filter-abund.xml filter-below-abund.xml
diffstat 2 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/filter-abund.xml	Sat Jul 12 16:41:53 2014 -0400
+++ b/filter-abund.xml	Sat Jul 12 17:03:04 2014 -0400
@@ -57,11 +57,11 @@
                         <param name="inputs" value="test-abund-read-2.fa" />
                         <param name="input_counting_table_filename" value="test-abund-read-2.ct" ftype="ct" />
                         <output name="output">
-				<discover_dataset name="test-abund-read-2.fa.abundfilt">
+				<!-- <discover_dataset name="test-abund-read-2.fa.abundfilt"> -->
                                 	<assert_contents>
                                         	<has_text text="GGTTGACGGGGCTCAGGG" />
                                 	</assert_contents>
-				</discover_dataset>
+				<!-- </discover_dataset> -->
                         </output>
                 </test>
                 <test interactor="api">
@@ -69,11 +69,11 @@
                         <param name="input_counting_table_filename" value="test-abund-read-2.ct" ftype="ct" />
 			<param name="cutoff" value="1" />
                         <output name="output">
-				<discover_dataset name="test-abund-read-2.fa.abundfilt">
+				<!-- <discover_dataset name="test-abund-read-2.fa.abundfilt"> -->
                                 	<assert_contents>
                                         	<has_text text="GGTTGACGGGGCTCAGGG" />
                                 	</assert_contents>
-				</discover_dataset>
+				<!-- </discover_dataset> -->
                         </output>
                 </test>
         </tests> 
--- a/filter-below-abund.xml	Sat Jul 12 16:41:53 2014 -0400
+++ b/filter-below-abund.xml	Sat Jul 12 17:03:04 2014 -0400
@@ -15,7 +15,7 @@
 	<command>
 mkdir output; cd output;
 @BINARY@
-$countingtable_to_load
+$input_counting_table_filename
 #for input in inputs
  $input
 #end for