# HG changeset patch
# User Michael R. Crusoe <mcrusoe@msu.edu>
# Date 1405198984 14400
# Node ID 0887e13644b83862403240054b651d87f6a385c3
# Parent  25a176335337aafffe003bed2a807b2d29c07fda
more updates

diff -r 25a176335337 -r 0887e13644b8 filter-abund.xml
--- a/filter-abund.xml	Sat Jul 12 16:41:53 2014 -0400
+++ b/filter-abund.xml	Sat Jul 12 17:03:04 2014 -0400
@@ -57,11 +57,11 @@
                         <param name="inputs" value="test-abund-read-2.fa" />
                         <param name="input_counting_table_filename" value="test-abund-read-2.ct" ftype="ct" />
                         <output name="output">
-				<discover_dataset name="test-abund-read-2.fa.abundfilt">
+				<!-- <discover_dataset name="test-abund-read-2.fa.abundfilt"> -->
                                 	<assert_contents>
                                         	<has_text text="GGTTGACGGGGCTCAGGG" />
                                 	</assert_contents>
-				</discover_dataset>
+				<!-- </discover_dataset> -->
                         </output>
                 </test>
                 <test interactor="api">
@@ -69,11 +69,11 @@
                         <param name="input_counting_table_filename" value="test-abund-read-2.ct" ftype="ct" />
 			<param name="cutoff" value="1" />
                         <output name="output">
-				<discover_dataset name="test-abund-read-2.fa.abundfilt">
+				<!-- <discover_dataset name="test-abund-read-2.fa.abundfilt"> -->
                                 	<assert_contents>
                                         	<has_text text="GGTTGACGGGGCTCAGGG" />
                                 	</assert_contents>
-				</discover_dataset>
+				<!-- </discover_dataset> -->
                         </output>
                 </test>
         </tests> 
diff -r 25a176335337 -r 0887e13644b8 filter-below-abund.xml
--- a/filter-below-abund.xml	Sat Jul 12 16:41:53 2014 -0400
+++ b/filter-below-abund.xml	Sat Jul 12 17:03:04 2014 -0400
@@ -15,7 +15,7 @@
 	<command>
 mkdir output; cd output;
 @BINARY@
-$countingtable_to_load
+$input_counting_table_filename
 #for input in inputs
  $input
 #end for