Mercurial > repos > chrisw > monorail_test

changeset 23:7f26c88a86d7 draft

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Uploaded
author chrisw
date Thu, 14 Nov 2019 06:01:46 +0000
parents e66c08660de6
children d16b3dc144d8
files monorail.xml
diffstat 1 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/monorail.xml	Thu Nov 14 05:33:19 2019 +0000
+++ b/monorail.xml	Thu Nov 14 06:01:46 2019 +0000
@@ -38,7 +38,7 @@
                     output="."
                     temp="./tmp"
     ]]></command>
-        <inputs>
+    <inputs>
  <!-- FASTQ input(s) and options specifically for paired-end data. -->
         <conditional name="singlePaired">
             <param name="sPaired" type="select" label="Single-end or paired-end reads">
@@ -72,11 +72,12 @@
         <conditional name="refGenomeSource">
                         <param name="genomeDir" type="select" label="Select reference genome index set" help="If your genome of interest is not listed, contact the Galaxy team">
                             <options from_data_table="rnastar_index2_versioned">
+                                <filter type="sort_by" column="2" />
                                 <validator type="no_options" message="No indexes are available for the selected input dataset"/>
                             </options>
                         </param>
         </conditional>
-        </inputs>
+    </inputs>
     <outputs>
         <data format="txt" name="auc" label="${tool.name} on ${on_string}: AUC" from_work_dir="bamcount_auc.tsv"/>
         <!--