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1 <tool id="IOTest" name="IO-Test" version="0.0.1">
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2 <description>for Galaxy-R IO-Testing</description>
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3 <command interpreter="bash">
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4 discard_stderr_wrapper.sh R --slave --vanilla -f IO_test.R --args key=$input01 test="" user="$__user_email__" toolPath=$__tool_data_path__ mylocals="${ locals() }" mydir="${ dir() }" myself="${ dir(self) }" mygroup=${ str($__app__.model.UserGroupAssociation.group) } url1=$__app__.config.fluent_host url2=$__app__.config.fluent_port rootPath=$__root_dir__ output01
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5 </command>
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6 <inputs>
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7 <param name="input01" type="data" format="txt" label="Text File" />
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8 </inputs>
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9 <outputs>
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10 <data name="output01" type="data" format="txt" label="IOreport" />
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11 </outputs>
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12
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13
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14 <help>
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15 [!!testing!!]
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16 This is just for testing the python/galaxy - R IO-Interface!
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17
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18 The output is plain text.
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19 [!!testing!!]
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20 </help>
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21 </tool>
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