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author christian-h
date Thu, 09 Jan 2014 07:55:26 -0500
parents be1a1416cf28
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<tool id="IOTest" name="IO-Test" version="0.0.1">
  <description>for Galaxy-R IO-Testing</description>
  <command interpreter="bash">
	discard_stderr_wrapper.sh R --slave --vanilla -f IO_test.R --args key=$input01 test="" user="$__user_email__" toolPath=$__tool_data_path__ mylocals="${ locals() }" mydir="${ dir() }" myself="${ dir(self) }" mygroup=${ str($__app__.model.UserGroupAssociation.group) } url1=$__app__.config.fluent_host url2=$__app__.config.fluent_port rootPath=$__root_dir__ output01
  </command>
  <inputs>
  	<param name="input01" type="data" format="txt" label="Text File" />
  </inputs>
  <outputs>
       <data name="output01" type="data" format="txt" label="IOreport" />
  </outputs> 


  <help>
[!!testing!!]
This is just for testing the python/galaxy - R IO-Interface!

The output is plain text.
[!!testing!!]
  </help>
</tool>