Mercurial > repos > christian-h > io_test
view ToolShedTest/IO_test.xml @ 1:822d596ca826 draft default tip
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author | christian-h |
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date | Thu, 09 Jan 2014 07:55:26 -0500 |
parents | be1a1416cf28 |
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<tool id="IOTest" name="IO-Test" version="0.0.1"> <description>for Galaxy-R IO-Testing</description> <command interpreter="bash"> discard_stderr_wrapper.sh R --slave --vanilla -f IO_test.R --args key=$input01 test="" user="$__user_email__" toolPath=$__tool_data_path__ mylocals="${ locals() }" mydir="${ dir() }" myself="${ dir(self) }" mygroup=${ str($__app__.model.UserGroupAssociation.group) } url1=$__app__.config.fluent_host url2=$__app__.config.fluent_port rootPath=$__root_dir__ output01 </command> <inputs> <param name="input01" type="data" format="txt" label="Text File" /> </inputs> <outputs> <data name="output01" type="data" format="txt" label="IOreport" /> </outputs> <help> [!!testing!!] This is just for testing the python/galaxy - R IO-Interface! The output is plain text. [!!testing!!] </help> </tool>