Mercurial > repos > chrisd > coverage_sampler
changeset 21:fad66d1d8bda draft
planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 6645049c8b4587e078cf326ee955970d76cebc7f-dirty
| author | chrisd |
|---|---|
| date | Wed, 29 Jun 2016 03:16:03 -0400 |
| parents | 2268b850b57a |
| children | a286d65db469 |
| files | coverage_sampler.xml |
| diffstat | 1 files changed, 9 insertions(+), 6 deletions(-) [+] |
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--- a/coverage_sampler.xml Wed Jun 29 03:13:35 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 03:16:03 2016 -0400 @@ -69,23 +69,26 @@ **Options** +- min This parameter specifies the starting sample level for the program. For example, a min value - - min This parameter specifies the starting sample level for the program. For example, a min value of five tells the program to begin by taking five percent of alignments from the alignment file. - - max This parameter specifies the ending sample level for the program. +- max This parameter specifies the ending sample level for the program. - - skip This parameter specifies the amount of levels to skip between min and max. For example, +- skip This parameter specifies the amount of levels to skip between min and max. For example, + if you specify a min value of five, a max value of 100, and a skip value of five, then + you would be sampling alignments in intervals of five. - - t This parameter specifies a threshold value. Only genes having a gene fraction greater than +- t This parameter specifies a threshold value. Only genes having a gene fraction greater than + this value are provided as output. - - samples This parameter specifies the amount of iterations you would like to sample at. For example, +- samples This parameter specifies the amount of iterations you would like to sample at. For example, + a sample value of five would sample each level five times. - ------ **Output**