# HG changeset patch # User chrisd # Date 1467184563 14400 # Node ID fad66d1d8bda6e01a24def4318820e51f034121b # Parent 2268b850b57ab395cca10039523295f95cfad34d planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 6645049c8b4587e078cf326ee955970d76cebc7f-dirty diff -r 2268b850b57a -r fad66d1d8bda coverage_sampler.xml --- a/coverage_sampler.xml Wed Jun 29 03:13:35 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 03:16:03 2016 -0400 @@ -69,23 +69,26 @@ **Options** +- min This parameter specifies the starting sample level for the program. For example, a min value - - min This parameter specifies the starting sample level for the program. For example, a min value of five tells the program to begin by taking five percent of alignments from the alignment file. - - max This parameter specifies the ending sample level for the program. +- max This parameter specifies the ending sample level for the program. - - skip This parameter specifies the amount of levels to skip between min and max. For example, +- skip This parameter specifies the amount of levels to skip between min and max. For example, + if you specify a min value of five, a max value of 100, and a skip value of five, then + you would be sampling alignments in intervals of five. - - t This parameter specifies a threshold value. Only genes having a gene fraction greater than +- t This parameter specifies a threshold value. Only genes having a gene fraction greater than + this value are provided as output. - - samples This parameter specifies the amount of iterations you would like to sample at. For example, +- samples This parameter specifies the amount of iterations you would like to sample at. For example, + a sample value of five would sample each level five times. - ------ **Output**