Mercurial > repos > chrisd > coverage_sampler
changeset 23:b0a92d97c485 draft
planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 04782fea617623cbaa3bfacf9f891252ffb9dcf8-dirty
| author | chrisd |
|---|---|
| date | Wed, 29 Jun 2016 03:20:57 -0400 |
| parents | a286d65db469 |
| children | 750a09c9cca2 |
| files | coverage_sampler.xml |
| diffstat | 1 files changed, 6 insertions(+), 6 deletions(-) [+] |
line wrap: on
line diff
--- a/coverage_sampler.xml Wed Jun 29 03:18:20 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 03:20:57 2016 -0400 @@ -69,19 +69,19 @@ **Options** -- min This parameter specifies the starting sample level for the program. For example, a min value +min This parameter specifies the starting sample level for the program. For example, a min value of five tells the program to begin by taking five percent of alignments from the alignment file. - -- max This parameter specifies the ending sample level for the program. -- skip This parameter specifies the amount of levels to skip between min and max. For example, +max This parameter specifies the ending sample level for the program. + +skip This parameter specifies the amount of levels to skip between min and max. For example, if you specify a min value of five, a max value of 100, and a skip value of five, then you would be sampling alignments in intervals of five. -- t This parameter specifies a threshold value. Only genes having a gene fraction greater than +t This parameter specifies a threshold value. Only genes having a gene fraction greater than this value are provided as output. -- samples This parameter specifies the amount of iterations you would like to sample at. For example, +samples This parameter specifies the amount of iterations you would like to sample at. For example, a sample value of five would sample each level five times. ------