# HG changeset patch # User chrisd # Date 1467184857 14400 # Node ID b0a92d97c48558a0e9f3854bc0b4acce87762e53 # Parent a286d65db4695295d29c99d7212269d1c34f4294 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 04782fea617623cbaa3bfacf9f891252ffb9dcf8-dirty diff -r a286d65db469 -r b0a92d97c485 coverage_sampler.xml --- a/coverage_sampler.xml Wed Jun 29 03:18:20 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 03:20:57 2016 -0400 @@ -69,19 +69,19 @@ **Options** -- min This parameter specifies the starting sample level for the program. For example, a min value +min This parameter specifies the starting sample level for the program. For example, a min value of five tells the program to begin by taking five percent of alignments from the alignment file. - -- max This parameter specifies the ending sample level for the program. -- skip This parameter specifies the amount of levels to skip between min and max. For example, +max This parameter specifies the ending sample level for the program. + +skip This parameter specifies the amount of levels to skip between min and max. For example, if you specify a min value of five, a max value of 100, and a skip value of five, then you would be sampling alignments in intervals of five. -- t This parameter specifies a threshold value. Only genes having a gene fraction greater than +t This parameter specifies a threshold value. Only genes having a gene fraction greater than this value are provided as output. -- samples This parameter specifies the amount of iterations you would like to sample at. For example, +samples This parameter specifies the amount of iterations you would like to sample at. For example, a sample value of five would sample each level five times. ------