Mercurial > repos > chrisd > coverage_sampler

annotate tool_dependencies.xml @ 11:19d3b80d9dea draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit aa09ca227b05d35df094ee20a11c011778da377d-dirty
author chrisd
date Wed, 29 Jun 2016 00:20:53 -0400
parents 825eaacb935f
children 284dec15f7f4
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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1 <?xml version="1.0"?>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
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2 <tool_dependency>
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chrisd
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3 <package name="csa" version="0.2">
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19d3b80d9dea planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit aa09ca227b05d35df094ee20a11c011778da377d-dirty
chrisd
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4 <install version="2.0">
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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5 <actions>
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17bce2f348b6 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit cd12289e62a04427f3db8ae40246cf25b8486c74-dirty
chrisd
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6 <action type="shell_command">git clone --recursive https://github.com/cdeanj/coverage_sampler.git</action>
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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7 <action type="shell_command">make</action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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8 <action type="move_file">
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19d3b80d9dea planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit aa09ca227b05d35df094ee20a11c011778da377d-dirty
chrisd
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9 <source>coverage_sampler</source>
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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10 <destination>$INSTALL_DIR/bin</destination>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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11 </action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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12 <action type="set_environment">
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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14 </action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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15 </actions>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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16 </install>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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17 <readme>Compiling csa requires a C++ compiler</readme>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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18 </package>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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19 </tool_dependency>