Mercurial > repos > charles_s_test > seqsero2

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planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
author charles_s_test
date Thu, 19 Oct 2017 18:16:51 -0400
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children 0d65b71ff8df
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1 <!DOCTYPE html>
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2 <html>
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3 <head>
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4 <title>SeqSero Results</title>
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5 </head>
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6 <body>
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7 <body style="font-family:Helvetica;">
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8 <p style="font-size:10px">
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9 <table border=1>
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10 <tr>
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11 <td>Input Files</td>
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12 <td>O antigen prediction</td>
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13 <td>H1 antigen prediction(fliC)</td>
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14 <td>H2 antigen prediction(fljB)</td>
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15 <td>Predicted antigenic profile</td>
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16 <td>Predicted serotype(s)</td>
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17 </tr>
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18 <tr>
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19 <td>dataset_15_sra_data9.fastq </td>
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20 <td>O-16</td>
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21 <td>d</td>
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22 <td>1,7</td>
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23 <td>16:d:1,7</td>
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24 <td>Gaminara</td>
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25 </tr>
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26 </table>
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27 <tr>
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28 <p>
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29 <td>dataset_15_sra_data9.fastq <br></td>
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30 <td>The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme. New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies. Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.</td>
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31 <td>/nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/fastq_tmp/dataset_15_sra_data9.fastq</td>
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32 </p>
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33 </tr>
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34 </body>
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35 </html>