Mercurial > repos > charles_s_test > seqsero2
diff Seqsero_result.html @ 0:6895de35a263 draft
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
| author | charles_s_test |
|---|---|
| date | Thu, 19 Oct 2017 18:16:51 -0400 |
| parents | |
| children | 0d65b71ff8df |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Seqsero_result.html Thu Oct 19 18:16:51 2017 -0400 @@ -0,0 +1,35 @@ +<!DOCTYPE html> +<html> +<head> +<title>SeqSero Results</title> +</head> +<body> +<body style="font-family:Helvetica;"> +<p style="font-size:10px"> +<table border=1> +<tr> +<td>Input Files</td> +<td>O antigen prediction</td> +<td>H1 antigen prediction(fliC)</td> +<td>H2 antigen prediction(fljB)</td> +<td>Predicted antigenic profile</td> +<td>Predicted serotype(s)</td> +</tr> +<tr> +<td>dataset_15_sra_data9.fastq </td> +<td>O-16</td> +<td>d</td> +<td>1,7</td> +<td>16:d:1,7</td> +<td>Gaminara</td> +</tr> +</table> +<tr> +<p> +<td>dataset_15_sra_data9.fastq <br></td> +<td>The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme. New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies. Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.</td> +<td>/nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/fastq_tmp/dataset_15_sra_data9.fastq</td> +</p> +</tr> +</body> +</html>