Mercurial > repos > boris > package_ape_3_0

changeset 8:60624d152d06 draft

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Uploaded
author boris
date Sun, 09 Jun 2013 17:17:28 -0400
parents 16657436da0b
children edb59aefba11
files tool_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Jun 07 12:37:49 2013 -0400
+++ b/tool_dependencies.xml	Sun Jun 09 17:17:28 2013 -0400
@@ -1,20 +1,21 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="R" version="2.15.0">
-        <repository changeset_revision="87a1a0aef849" name="package_r_2_15" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
+        <repository changeset_revision="f6b8f51b71a2" name="package_r_2_15" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
     <package name="ape" version="3.0-8">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://cran.r-project.org/src/contrib/ape_3.0-8.tar.gz</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="87a1a0aef849" name="package_r_2_15" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/">
+                    <repository changeset_revision="f6b8f51b71a2" name="package_r_2_15" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/">
                         <package name="R" version="2.15.0" />
                     </repository>
                 </action>
                 <action type="make_directory">$INSTALL_DIR</action>
-                <action type="shell_command"> export R_HOME=$R_HOME &amp;&amp; export R_LIBS=$R_LIBS &amp;&amp; R CMD INSTALL ape_3.0-8.tar.gz -l $INSTALL_DIR </action>
+                <action type="shell_command"> export PATH=$PATH &amp;&amp; export R_HOME=$R_HOME &amp;&amp; export R_LIBS=$R_LIBS &amp;&amp; R CMD INSTALL ape_3.0-8.tar.gz -l $INSTALL_DIR </action>
                 <action type="set_environment">
+                <environment_variable action="set_to" name="PATH">$ENV[PATH]</environment_variable>
                 <environment_variable action="set_to" name="R_HOME">$ENV[R_HOME]</environment_variable>
                 <environment_variable action="set_to" name="R_LIBS">$ENV[R_LIBS]</environment_variable>
                 <environment_variable action="prepend_to" name="R_LIBS">$INSTALL_DIR</environment_variable>