changeset 14:b5b14e3e3c61

toolshed13
author biomonika <biomonika@psu.edu>
date Wed, 10 Sep 2014 11:07:54 -0400
parents ef5c8ed727b0
children a4f2492ce714
files tool_dependencies.xml
diffstat 1 files changed, 7 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Sep 10 10:49:56 2014 -0400
+++ b/tool_dependencies.xml	Wed Sep 10 11:07:54 2014 -0400
@@ -17,11 +17,15 @@
         </install>
         <readme>Compiling samtools with fPIC in order to create bam.h and compiled libbam.a files</readme>
     </package>
+
+ <package name="perl" version="5.18.1">
+        <repository name="package_perl_5_18" owner="iuc" prior_installation_required="True" />
+    </package>
     <package name="bioperl" version="1.6.922">
         <install version="1.0">
             <actions>
                 <action type="setup_perl_environment">
-                    <repository changeset_revision="28865aa39fbb" name="package_perl_5_18" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="091a97f8c585" name="package_perl_5_18" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="perl" version="5.18.1" />
                     </repository>
                    <!-- allow downloading and installing an Perl package from cpan.org-->
@@ -42,4 +46,6 @@
             Bundle::BioPerl
         </readme>
     </package>
+
+
 </tool_dependency>
\ No newline at end of file