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1 <tool_dependency>
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2 <package name="CCAT" version="3.0">
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3 <install version="1.0">
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4 <actions>
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5 <action type="download_by_url">http://cmb.gis.a-star.edu.sg/ChIPSeq/tools/CCAT3.0.tar.gz</action>
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6 <action type="change_directory">src</action>
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7 <action type="shell_command">./make</action>
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8 <action type="move_file">
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9 <source>../bin/CCAT</source>
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10 <destination>$INSTALL_DIR/bin</destination>
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11 </action>
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12
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13 <action type="set_environment">
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14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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15 </action>
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16 </actions>
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17 </install>
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18 <readme>Downloading and compiling CCAT. A Signal-Noise model for significance analysis of ChIP-seq with Negative Control.</readme>
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19 </package>
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20 </tool_dependency>
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