Mercurial > repos > bgruening > deseq2
changeset 1:c0dfa0f736aa draft
Uploaded
| author | bgruening |
|---|---|
| date | Sun, 30 Jun 2013 17:41:09 -0400 |
| parents | b02d2083dd89 |
| children | e60aee7b3e95 |
| files | deseq2.xml tool_dependencies.xml |
| diffstat | 2 files changed, 17 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/deseq2.xml Sun Jun 30 17:21:34 2013 -0400 +++ b/deseq2.xml Sun Jun 30 17:41:09 2013 -0400 @@ -1,7 +1,11 @@ <tool id="deseq2" name="DESeq2" version="0.1"> <description>deseq</description> - + <requirements> + <requirement type="package" version="3.0.1">R_3_0_1</requirement> + <requirement type="package" version="2.3.6">rpy2_2_3_6</requirement> + <requirement type="package" version="1.0.17">deseq2</requirement> + </requirements> <command interpreter="python"> deseq2.py > $outfile </command>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Sun Jun 30 17:41:09 2013 -0400 @@ -0,0 +1,12 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="R_3_0_1" version="3.0.1"> + <repository changeset_revision="4e9dce1105cd" name="precommit_test" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="rpy2_2_3_6" version="2.3.6"> + <repository changeset_revision="67c8b836d765" name="package_rpy2_2_3_6" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="deseq2" version="1.0.17"> + <repository changeset_revision="0fa6327f9281" name="upload_testing" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency>