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view tool_dependencies.xml @ 3:7fe7c27092e0 draft

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author bernhardlutz
date Thu, 05 Dec 2013 15:49:58 -0500
parents 1d177cf141ef
children bdbf71f6480e
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<tool_dependency>
    <package name="vienna_rna" version="1.8.5">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://www.tbi.univie.ac.at/~ivo/RNA/ViennaRNA-1.8.5.tar.gz</action>
                <action type="command">./configure --prefix $INSTALL_DIR</action>
                <action type="change_directory">Perl</action>
                <action type="command">perl Makefile.PL PREFIX=$INSTALL_DIR/perl</action>
                <action type="change_directory">..</action>
                <action type="make_install" />

                <action type="set_environment">
                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
                    <environment_variable name="PERL5LIB" action="prepend_to">$INSTALL_DIR/perl/lib</environment_variable>
                </action>
            </actions>
        </install>
        <readme>Compiling ViennaRNA requires a C compiler (typically gcc)</readme>
    </package>
</tool_dependency>