Mercurial > repos > bernhardlutz > rest_tool
view rest_tool.xml @ 0:a9793e52a3ef draft
Uploaded
author | bernhardlutz |
---|---|
date | Sun, 23 Mar 2014 09:27:27 -0400 |
parents | |
children |
line wrap: on
line source
<tool id="rest_tool" name="Fetch Data from pubchem" version="0.1.0"> <description>Fetch pubchem data</description> <version_command>echo "0.1.0"</version_command> <requirements> <requirement type="set_environment">REST_TOOL_SCRIPT_PATH</requirement> </requirements> <command> python \$GRAPHCONVERTER_SCRIPT_PATH/rest_tool.py --id $id --type $input_type --outformat $output_format </command> <inputs> <param format="txt" name="id" type="text" label="Specify the ID" /> <param name="input_type" multiple="false" type="select" label="Input Type"> <option value="bioassay">BioAssay</option> <option value="compound">Compound</option> </param> <param name="output_format" type="select" label="Output Format"> <option value="tsv">tsv</option> <option value="csv">csv</option> <option value="txt">txt</option> <option value="png">png</option> <option value="json">json</option> </param> </inputs> <outputs> <data format="csv" name="output"> <change_format> <when input="output_format" value="tsv" format="tsv" /> <when input="output_format" value="png" format="png" /> <when input="output_format" value="csv" format="csv" /> <when input="output_format" value="txt" format="txt" /> <when input="output_format" value="json" format="json" /> </change_format> </data> </outputs> <tests> </tests> <help> **What it does** This tool fetches data from pubchem </help> </tool>