Mercurial > repos > bebatut > data_manager_metaphlan2_database_downloader

changeset 24:d933adc537a2 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit b'38c128dc54d0f095464e1e6cfba0685d4c64ef43\n'-dirty
author bebatut
date Fri, 03 Mar 2017 08:06:00 -0500
parents bf858d6f7365
children
files data_manager/data_manager_metaphlan2_download.py data_manager/data_manager_metaphlan2_download.xml
diffstat 2 files changed, 1 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/data_manager_metaphlan2_download.py	Thu Mar 02 11:22:18 2017 -0500
+++ b/data_manager/data_manager_metaphlan2_download.py	Fri Mar 03 08:06:00 2017 -0500
@@ -1,7 +1,6 @@
 #!/usr/bin/env python
 #
 # Data manager for reference data for the 'humann2' Galaxy tools
-import datetime
 import json
 import optparse
 import os
@@ -94,7 +93,6 @@
       target_dir: directory to put copy or link to the data file
 
     """
-    today = datetime.date.today()
     cmd = "download_metaphlan2_db.py --output %s" % (target_dir)
     db_dir = os.path.join(target_dir, build)
     subprocess.check_call(cmd, shell=True)
--- a/data_manager/data_manager_metaphlan2_download.xml	Thu Mar 02 11:22:18 2017 -0500
+++ b/data_manager/data_manager_metaphlan2_download.xml	Fri Mar 03 08:06:00 2017 -0500
@@ -13,7 +13,7 @@
     <command><![CDATA[
         python '$__tool_directory__/data_manager_metaphlan2_download.py'
             --database $database
-            "${out_file}"
+            '${out_file}'
     ]]></command>
 
     <inputs>