Mercurial > repos > bebatut > data_manager_metaphlan2_database_downloader

changeset 23:bf858d6f7365 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit b'cf8373aeed58964f1d139a23cd1ec4698683c60e\n'-dirty
author bebatut
date Thu, 02 Mar 2017 11:22:18 -0500
parents 8602983cb86f
children d933adc537a2
files data_manager/data_manager_metaphlan2_download.py
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/data_manager_metaphlan2_download.py	Wed Mar 01 11:04:26 2017 -0500
+++ b/data_manager/data_manager_metaphlan2_download.py	Thu Mar 02 11:22:18 2017 -0500
@@ -98,13 +98,13 @@
     cmd = "download_metaphlan2_db.py --output %s" % (target_dir)
     db_dir = os.path.join(target_dir, build)
     subprocess.check_call(cmd, shell=True)
-    os.rename(os.path.join(target_dir,"db_v20"), db_dir)
+    os.rename(os.path.join(target_dir, "db_v20"), db_dir)
     add_data_table_entry(
         data_tables,
         table_name,
         dict(
             dbkey=build,
-            value=today.isoformat(),
+            value="mpa_v20_m200",
             name="MetaPhlAn2 clade-specific marker genes",
             path=db_dir))