Mercurial > repos > bcrain-completegenomics > testing1
changeset 9:326dbb82d58b draft
Uploaded
| author | bcrain-completegenomics |
|---|---|
| date | Wed, 06 Jun 2012 17:04:11 -0400 |
| parents | 2aa6f84b0e5c |
| children | 50d80449f2f6 |
| files | cgatools_suite/.DS_Store cgatools_suite/._datatypes_conf.xml cgatools_suite/._tool_config.xml.sample.xml cgatools_suite/._tool_data_table_conf.xml.sample.xml cgatools_suite/tool_config.xml cgatools_suite/tool_config.xml.sample.xml cgatools_suite/tool_data_table_conf.xml cgatools_suite/tool_data_table_conf.xml.sample.xml |
| diffstat | 8 files changed, 32 insertions(+), 32 deletions(-) [+] |
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--- a/cgatools_suite/tool_config.xml Wed Jun 06 17:00:08 2012 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,20 +0,0 @@ -<?xml version="1.0"?> -<toolbox> - <!-- - Add the following section to tool_conf.xml file in your Galaxy distribution if you are adding Complete Genomics tools manually to your Galaxy instance - --> - <section name="Complete Genomics" id="cgi"> - <label text="cgatools" id="cgi_cgatools" /> - <tool file="cgatools/listvariants.xml" /> - <tool file="cgatools/testvariants.xml" /> - <tool file="cgatools/listtestvariants.xml" /> - <tool file="cgatools/join.xml" /> - <tool file="cgatools/calldiff.xml" /> - <tool file="cgatools/snpdiff.xml" /> - <tool file="cgatools/junctiondiff.xml" /> - <tool file="cgatools/varfilter.xml" /> - <label text="Perl scripts" id="cgi_perl" /> - <tool file="cgi_scripts/List_Unique_Variants.xml" /> - <tool file="cgi_scripts/Calculate_TestVariants_Variant_Frequencies.xml" /> - </section> -</toolbox> \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cgatools_suite/tool_config.xml.sample.xml Wed Jun 06 17:04:11 2012 -0400 @@ -0,0 +1,20 @@ +<?xml version="1.0"?> +<toolbox> + <!-- + Add the following section to tool_conf.xml file in your Galaxy distribution if you are adding Complete Genomics tools manually to your Galaxy instance + --> + <section name="Complete Genomics" id="cgi"> + <label text="cgatools" id="cgi_cgatools" /> + <tool file="cgatools/listvariants.xml" /> + <tool file="cgatools/testvariants.xml" /> + <tool file="cgatools/listtestvariants.xml" /> + <tool file="cgatools/join.xml" /> + <tool file="cgatools/calldiff.xml" /> + <tool file="cgatools/snpdiff.xml" /> + <tool file="cgatools/junctiondiff.xml" /> + <tool file="cgatools/varfilter.xml" /> + <label text="Perl scripts" id="cgi_perl" /> + <tool file="cgi_scripts/List_Unique_Variants.xml" /> + <tool file="cgi_scripts/Calculate_TestVariants_Variant_Frequencies.xml" /> + </section> +</toolbox> \ No newline at end of file
--- a/cgatools_suite/tool_data_table_conf.xml Wed Jun 06 17:00:08 2012 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,12 +0,0 @@ -<tables> - <!-- - Add the following section to tool_data_table_conf.xml file in your Galaxy distribution if you are adding Complete Genomics tools manually to your Galaxy instance - --> - <!-- Start Location of cgatools crr files --> - <table name="cg_crr_files" comment_char="#"> - <columns>value, dbkey, name, path</columns> - <file path="tool-data/cg_crr_files.loc" /> - </table> - <!-- End Location of cgatools crr files --> -</tables> -
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cgatools_suite/tool_data_table_conf.xml.sample.xml Wed Jun 06 17:04:11 2012 -0400 @@ -0,0 +1,12 @@ +<tables> + <!-- + Add the following section to tool_data_table_conf.xml file in your Galaxy distribution if you are adding Complete Genomics tools manually to your Galaxy instance + --> + <!-- Start Location of cgatools crr files --> + <table name="cg_crr_files" comment_char="#"> + <columns>value, dbkey, name, path</columns> + <file path="tool-data/cg_crr_files.loc" /> + </table> + <!-- End Location of cgatools crr files --> +</tables> +