Mercurial > repos > zzhou > bamedit
comparison tool_dependencies.xml @ 98:efce52f9ede5 draft
Uploaded
| author | zzhou |
|---|---|
| date | Tue, 27 Nov 2012 15:53:46 -0500 |
| parents | 1b8b1c9cf1a8 |
| children | a83e7618578c |
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| 97:175ed71ce820 | 98:efce52f9ede5 |
|---|---|
| 10 <action type="shell_command">chmod ago+x samtools</action> | 10 <action type="shell_command">chmod ago+x samtools</action> |
| 11 <action type="move_file"> | 11 <action type="move_file"> |
| 12 <source>samtools</source> | 12 <source>samtools</source> |
| 13 <destination>$INSTALL_DIR/bin</destination> | 13 <destination>$INSTALL_DIR/bin</destination> |
| 14 </action> | 14 </action> |
| 15 | |
| 16 <action type="download_by_url">http://ec2-184-73-120-244.compute-1.amazonaws.com/modENCODE_Galaxy/tool_dependencies/samtools/maq2sam-long</action> | 15 <action type="download_by_url">http://ec2-184-73-120-244.compute-1.amazonaws.com/modENCODE_Galaxy/tool_dependencies/samtools/maq2sam-long</action> |
| 17 <action type="shell_command">chmod ago+x maq2sam-long </action> | 16 <action type="shell_command">chmod ago+x maq2sam-long</action> |
| 18 <action type="move_file"> | 17 <action type="move_file"> |
| 19 <source>maq2sam-long</source> | 18 <source>maq2sam-long</source> |
| 20 <destination>$INSTALL_DIR/bin</destination> | 19 <destination>$INSTALL_DIR/bin</destination> |
| 21 </action> | 20 </action> |
| 22 <action type="set_environment"> | 21 <action type="set_environment"> |