Mercurial > repos > yhoogstrate > varscan_mpileup2snp_from_bam

changeset 72:ff93e4f1831b draft

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Uploaded
author yhoogstrate
date Wed, 21 May 2014 04:08:53 -0400
parents ea6e9c144fee
children e263cc6f89bd
files varscan_mpileup2snp_from_bam.xml
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/varscan_mpileup2snp_from_bam.xml	Wed May 21 04:08:26 2014 -0400
+++ b/varscan_mpileup2snp_from_bam.xml	Wed May 21 04:08:53 2014 -0400
@@ -2,6 +2,7 @@
 <tool id="varscan_mpileup2snp_from_bam" name="VarScan2 Call SNPs from BAM">
 	<description>VarScan2 SNP/SNV detection; directly reading *.bam file(s) &amp; using parallel mpileup generation, to avoid unncessairy I/O overhead and increase performance.</description>
 	<requirements>
+		<requirement type="package" version="5.9">ncurses</requirement>
 		<requirement type="package" version="0.1.19">samtools_parallel_mpileup</requirement>
 		<requirement type="package" version="2.3.6">varscan</requirement>
 		<requirement type="package" version="0.1.19">package_samtools_0_1_19</requirement>