Mercurial > repos > yhoogstrate > segmentation_fold
changeset 7:bff6e82064da draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 4a09ba36d8feeea3b61ab5b2b113aac7f34d389f-dirty
| author | yhoogstrate |
|---|---|
| date | Thu, 10 Mar 2016 03:22:58 -0500 |
| parents | a61db7f9d80b |
| children | 8dcf7ca46c72 |
| files | scan-for-segments.xml segmentation-fold.xml |
| diffstat | 2 files changed, 4 insertions(+), 3 deletions(-) [+] |
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--- a/scan-for-segments.xml Fri Mar 04 05:58:06 2016 -0500 +++ b/scan-for-segments.xml Thu Mar 10 03:22:58 2016 -0500 @@ -13,10 +13,11 @@ <command><![CDATA[ scan-for-segments -T \${GALAXY_SLOTS:-4} + -x #if str($parameters.use_custom_xml) == "true" - -x "${parameters.input_xml}" + "${parameters.input_xml}" #else - -x "\$SEGMENTATION_FOLD_DEFAULT_XML" + "\$SEGMENTATION_FOLD_DEFAULT_XML" #end if -p "in-depth" "${input_fasta}"
--- a/segmentation-fold.xml Fri Mar 04 05:58:06 2016 -0500 +++ b/segmentation-fold.xml Thu Mar 10 03:22:58 2016 -0500 @@ -61,7 +61,7 @@ </inputs> <outputs> - <data format="dot-bracket" name="output_dbn" label="asdasdasd" /> + <data format="dbn" name="output_dbn" label="segmentation-fold" /> <!--<data format="dot-bracket" name="output_dbn" label="${tool.name} on ${str(input.input_fasta.hid) + ': ' + input.input_fasta.name if $input.method == 'fasta' else $input.input_sequence.upper() }" />--> </outputs>