# HG changeset patch
# User yhoogstrate
# Date 1457598178 18000
# Node ID bff6e82064dad76002eae6f5449623aec9917546
# Parent  a61db7f9d80b64dcb809a1eaff81c81014090d36
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 4a09ba36d8feeea3b61ab5b2b113aac7f34d389f-dirty

diff -r a61db7f9d80b -r bff6e82064da scan-for-segments.xml
--- a/scan-for-segments.xml	Fri Mar 04 05:58:06 2016 -0500
+++ b/scan-for-segments.xml	Thu Mar 10 03:22:58 2016 -0500
@@ -13,10 +13,11 @@
     <command><![CDATA[
         scan-for-segments
             -T \${GALAXY_SLOTS:-4}
+            -x
             #if str($parameters.use_custom_xml) == "true"
-                -x "${parameters.input_xml}"
+                "${parameters.input_xml}"
             #else
-                -x "\$SEGMENTATION_FOLD_DEFAULT_XML"
+                "\$SEGMENTATION_FOLD_DEFAULT_XML"
             #end if
             -p "in-depth"
             "${input_fasta}"
diff -r a61db7f9d80b -r bff6e82064da segmentation-fold.xml
--- a/segmentation-fold.xml	Fri Mar 04 05:58:06 2016 -0500
+++ b/segmentation-fold.xml	Thu Mar 10 03:22:58 2016 -0500
@@ -61,7 +61,7 @@
     </inputs>
     
     <outputs>
-        <data format="dot-bracket" name="output_dbn" label="asdasdasd" />
+        <data format="dbn" name="output_dbn" label="segmentation-fold" />
         <!--<data format="dot-bracket" name="output_dbn" label="${tool.name} on ${str(input.input_fasta.hid) + ': ' + input.input_fasta.name if $input.method == 'fasta' else $input.input_sequence.upper() }" />-->
     </outputs>