Mercurial > repos > yhoogstrate > fuma

changeset 1:56b2b5084c85 draft

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updates to v2.6.6
author yhoogstrate
date Sat, 21 Mar 2015 03:01:14 -0400
parents 267d0c2ebe56
children 76293f7745ff
files fuma.xml tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/fuma.xml	Sat Mar 21 02:59:14 2015 -0400
+++ b/fuma.xml	Sat Mar 21 03:01:14 2015 -0400
@@ -1,9 +1,9 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<tool id="fuma" name="FuMa" version="2.6.3.a">
+<tool id="fuma" name="FuMa" version="2.6.6.a">
 	<description>FuMa (FusionMatcher) matches detected fusion genes based on gene name subset matching (designed in particular for RNA-Seq).</description>
 	
 	<requirements>
-		<requirement type="package" version="2.6.3">fuma</requirement>
+		<requirement type="package" version="2.6.6">fuma</requirement>
 	</requirements>
 	
 	<version_command>fuma --version</version_command><!-- -V also works, but is not GNU standard -->
--- a/tool_dependencies.xml	Sat Mar 21 02:59:14 2015 -0400
+++ b/tool_dependencies.xml	Sat Mar 21 03:01:14 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-	<package name="fuma" version="2.6.3">
+	<package name="fuma" version="2.6.6">
 		<install version="1.0">
 			<actions>
 				<action type="make_directory">$INSTALL_DIR/lib/python</action>
@@ -9,7 +9,7 @@
 				<action type="shell_command">
 					git clone https://github.com/yhoogstrate/fuma.git fuma &amp;&amp;
 					cd fuma &amp;&amp;
-					git reset --hard 7d22741f37549eb65b85136316ca0dd2cda529ec &amp;&amp;
+					git reset --hard 433d68af9a1b113bd0ae09c2b80279c589ac2d5a &amp;&amp;
 					
 					export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python &amp;&amp;
 					python setup.py build &amp;&amp;