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1 <?xml version="1.0"?>
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2 <tool_dependency>
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13
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3 <!--
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4 Because I accidentally included too much large files within the
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5 GitHub repository of FlaiMapper it is not convenient to use git
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6 to pull the latest code from. Downloading simply takes way to
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7 long and the package size is unnecessairy large.
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8
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9 Instead, I have created an egg that can be installed using
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10 easy_install.
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11 -->
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12
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12
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13 <package name="pysam" version="0.8.1">
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14 <repository changeset_revision="6b6843e15541" name="package_pysam_0_8_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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15 </package>
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16
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17 <package name="flaimapper" version="1.1.2">
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18 <install version="1.0">
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19 <actions>
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20
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21 <action type="set_environment_for_install">
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22 <repository changeset_revision="6b6843e15541" name="package_pysam_0_8_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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23 <package name="pysam" version="0.8.1" />
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24 </repository>
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25 </action>
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26
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27 <action type="make_directory">$INSTALL_DIR</action>
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28 <action type="make_directory">$INSTALL_DIR/bin</action>
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29
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30 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR:$INSTALL_DIR"/lib/python":$INSTALL_DIR"/lib64/python":$PYSAM_PATH:$PYSAM_PATH"/lib/python":$PYSAM_PATH"/lib64/python" ; easy_install --prefix=$INSTALL_DIR --install-dir=$INSTALL_DIR --script-dir=$INSTALL_DIR/bin $REPOSITORY_INSTALL_DIR"/egg/flaimapper-1.1.2-py2.7.egg"</action>
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31
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32 <action type="set_environment">
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33 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable>
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34 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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35 </action>
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36 </actions>
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37 </install>
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38 </package>
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39 </tool_dependency>
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